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DNA restriction analysis
DNA can be isolated in the Genetics
laboratory from a variety of animal tissues (e.g. liver,
muscle, blood) using different techniques, depending on the
kind of tissue and the method of preservation. Fish samples
from the Bay of Biscay and the Gulf of Guinea have been
successfully transported to Crete and used for DNA
isolation. The Department has applied restriction analysis,
especially of mitochondrial DNA (mtDNA), which is a very
powerful tool for studying genetic polymorphism, in several
fish species: sardine, anchovy, swordfish, gilthead sea
bream
Polymerase Chain Reaction
(PCR) amplification.
The most modern technique, allowing a short
DNA segment to be amplified enormously using specific
primers (oligonucleotides) PCR amplification has been
successfully applied for different regions of fish mtDNA
(D-loop, Cyto b, etc) as well as in microsatellite DNA
DNA sequencing
The sequence of nucleotides on the chain of
DNA can be determined according to the Dideoxy method, using
Poly-Acrylanide gel electrophoresis.
Microsatellite DNA
analysis.
The whole range of microsatellite DNA
analysis has successfully been carried out for the gilthead
sea bream and already one of the broodstock of IMBC has been
genetically tagged. The application of this method has
already been initiated in a number of other marine species
(Sparidae species, swordfish, catfish, anchovy, oyster).
Allozyme polymorphism
The Department has extensive experience in
scoring allozyme polymorphism in a variety of marine
species, such as sardine, anchovy, and oysters.
Allozymes can provide useful insights into the population
structure of natural stocks, the degree of inbreeding of
both natural and reared populations, the presence of
hybrids, etc.
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