Bioinformatics at the John Innes Centre
Bioinformatics at the John Innes Centre
Jo Dicks, Matthew Couchman, Mazda Hewitt, Andrew O'Malia
and Jeremy Dickson
John Innes Centre, Norwich Research Park, Colney, Norwich
NR4 7UH, UK
A programme in bioinformatics has recently been initiated
at the John Innes Centre (JIC), a world leader in the
biology of plant species. Currently, the main thrust
of the group is in comparative genome analysis. Our
work ranges from mathematical biology through to the
development of databases and novel graphical software
components.
One of our major projects is the UK CropNet (http://synteny.nott.ac.uk).
This bioinformatics network comprises six groups from
UK crop research centres and has been established as
part of the BBSRC's Plant and Animal Genome Analysis
special initiative. Its work relates to the development,
management and distribution of information relating
to comparative mapping. At JIC we are working on the
interlinking of multiple databases over the World Wide
Web and novel ways in which to display comparative
genome data.
A new initiative in the mathematical modelling of chromosomal
evolution in plants is now starting. In order for algorithms
and results of analyses to be fully publicly available,
we will be building a series of components to display
and manipulate phylogenetic data. In addition, we will
shortly become involved in a project relating to the
evolution of viral vectors and consequently the development
of displays for phylogeographic information.